TABLE 2.
Mean distances from viral IP to closest HSR (kb)a
Subset | Virus | dup | ddown |
---|---|---|---|
a | HPV | 0.57 (n = 7, P < 0.005) | 7.3 (n = 10) |
HBV | 0.00b(n = 3, P < 0.002) | 0.00 (n = 3, P < 0.002) | |
SV40 | 10.2 (n = 2) | 0.66 (n = 3, P < 0.01) | |
HTLV-1 in ATL | 0.09c(n = 3) | ||
b | HPV + HBV in growth control genes | 11.6 (n = 7) | 5.2 (n = 8) |
c | HTLV-1 in HAM/TSP | 5.9 (n = 2) | 12.8 (n = 8) |
dup and ddown give the mean distance from the viral IP to the closest HSR for the following subsets of viral integrations: a, integrations in tumors and transformed cell lines; b, integrations in tumors and cell lines that disrupted genes involved in the control of cellular growth; and c, integrations in nonneoplastic cells. P values are given when observed means are significantly different from values obtained under the assumption of random integration.
When an IP occurred within an HSR, D = 0.
Upstream and downstream.