Table 2.
Proteomic analyses of the proteins in the crystals of V-CO3.3 and V-AB8.18 strains
| Isolate | Na | Unusedb | Coverage % | Accession | Name | Peptides (95%) | Nc |
|---|---|---|---|---|---|---|---|
| V-CO3.3 | 1 | 417.93 | 90.359 | gi|862,637 | Cry5Ba | 1917 | 460 |
| 2 | 32.79 | 24.220 | gi|40,294 | Cry1Ca | 241 | 24 | |
| 3 | 19.89 | 21.259 | gi|142,765 | Cry1Aa | 170 | 19 | |
| 4 | 8.01 | 15.539 | gi|40,280 | Cry1Da | 136 | 16 | |
| 6 | 3.76 | 19.28 | gi|33,765,730 | Cry1Fa | 135 | 15 | |
| V-AB8.18 | 1 | 220.51 | 97.049 | gi|142,776 | App6Aa | 2107 | 370 |
| 2 | 87.14 | 61.53 | gi|862,637 | Cry5Ba | 187 | 57 | |
| 3 | 38 | 27.419 | gi|40,294 | Cry1Ca | 213 | 28 | |
| 4 | 18.87 | 23.549 | gi|142,765 | Cry1Aa | 327 | 37 | |
| 5 | 6.02 | 15.710 | gi|40,280 | Cry1Da | 137 | 17 |
aThe rank of the specified protein relative to all other detected proteins
bProtScore; a measure of the protein confidence for a detected protein, calculated from the peptide confidence for peptides from spectra that are not already completely used by higher scoring winning proteins
cThe number of peptides with the contribution value more than zero