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. 2024 Nov 5;27(12):111319. doi: 10.1016/j.isci.2024.111319

Table 3.

Core AR genes identified in oropharyngeal and fecal samples

Fecal samples
 Oropharyngeal samples
Gene Antibiotic type N vara % smpb Gene Antibiotic type N var % smpb
ermB Macrolide 19 95 ermB Macrolide 18 81
mefA Macrolide 14 87 mefA Macrolide 14 99
msrD Macrolide 2 85 msrD Macrolide 2 99
catA Chloramphenicol 18 93 cfx Beta-lactam 13 97
ermF Macrolide 6 88 lsaC Lincosamide, streptogramin 1 89
lnuC Lincosamide 1 87 patA Quinolone 1 81
sat Nucleoside 4 80 ermX Macrolide 7 80
a

The number of known sequence variants of these genes identified in samples of a certain biotope.

b

The percent of samples of a certain biotope having this gene in at least one sequence variant Also see Tables S5 and S6 for “core” AR gene sequence variants, and Table S7 for biotope-specific sequence variants.