Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2024 Oct 31;21(12):2271–2286. doi: 10.1038/s41592-024-02471-8

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Extended Data Fig. 5 — (a) RNA velocity streamline plots obtained with Dynamo⁸ using metabolically-labeled data (scEU-seq) for 2,793 RPE1 cells⁴³, represented on the FUCCI-defined embedding space and colored by pseudotime (top) or FUCCI score (bottom). (b) Scatter-plot of cell cycle phase pseudotime from scvelo⁴ (top) and VeloCycle (bottom) compared to the ground truth FUCCI phase assignment acquired for RPE1 cells in (a). Pearson’s circular correlation coefficient is indicated in red. (c) Posterior estimate plot of velocity estimate for RPE1 cells obtained with VeloCycle. (d) Scatter-plot of per cell FUCCI signal (GMNN-GRP in green; CDT1-RFP in red) along the VeloCycle phase.