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. 2024 Dec 5;25:308. doi: 10.1186/s13059-024-03435-z

Fig. 7.

Fig. 7

Exploration of COL4A1 and ITGAV in TCGA and CPTAC. Gene expression in tumor and normal for COL4A1 (A) and ITGAV (E). Protein abundance between low-stage ccRCC (I, II, and III) and high-stage ccRCC (IV) for COL4A1 (B) and ITGAV (F). C and G show the copy-number change associated with the 2 genes. TCGA gene expression against methylation levels are shown in D and H. Abbreviations: CPTAC, Clinical Proteomic Tumor Analysis Consortium; TGCA, The Cancer Genome Atlas