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. 2024 Nov 7;25(12):5780–5809. doi: 10.1038/s44319-024-00304-5

Figure EV5. Summary table for the search of close proximity sense-antisense EVD-LTR events.

Figure EV5

Putative origin of LTR hairpins as consequence of EVD transposition in tandem or nested configurations next to the scheme of the strategy used to find them using discordant read mates from EM-seq where both read mates map to EVD-LTR. The table indicates the occurrence and number of read mates found in each sample. Arbitrary threshold of at least three paired read mates was set to confidentially identify two LTRs in close proximity. N: non-occurrence, y: presence of at least one discordant paired read mate, Y: presence of discordant paired read mates and above threshold for confident calling.