Table 2. Min, max, and median values of metabolic activity of CLL cells cultured in 24× diluted CMC-PEG compared to CLL cells cultured conventionally.
Group | IGHV | TP53 | NOTCH1 | Patient ID | Min (%) | Max (%) | Median (%) | Median of a group (%) | Median of all (%) |
---|---|---|---|---|---|---|---|---|---|
Gr1 | Unmut | Mut | Mut | Pt08 | 87.52 (D7) | 160.04 (D2) | 119.22 | 115.59 | 115.20 |
Pt09 | 87.20 (D7) | 129.69 (D1) | 113.53 | ||||||
Pt10 | 84.16 (D7) | 142.67 (D1) | 119.45 | ||||||
Gr2 | Unmut | Mut | WT | Pt11 | 94.45 (D4) | 154.08 (D7) | 119.37 | 112.63 | |
Pt12 | 66.57 (D7) | 121.40 (D4) | 109.87 | ||||||
Pt13 | 71.20 (D7) | 150.57 (D2) | 111.08 | ||||||
Gr3 | Unmut | WT | Mut | Pt14 | 91.44 (D2) | 156.10 (D4) | 116.57 | 111.44 | |
Pt15 | 83.33 (D7) | 165.61 (D1) | 114.91 | ||||||
Pt16 | 87.41 (D4) | 149.85 (D4) | 98.47 | ||||||
Gr4 | Unmut | WT | WT | Pt17 | 73.02 (D7) | 169.57 (D4) | 137.27 | 126.54 | |
Pt18 | ND | ND | ND | ||||||
Pt19 | 61.86 (D7) | 150.59 (D4) | 113.55 | ||||||
Gr5 | Mut | WT | WT | Pt20 | 111.75 (D2) | 149.02 (D7) | 121.35 | 120.48 | |
Pt21 | 77.37 (D7) | 157.81 (D2) | 108.48 | ||||||
Pt22 | 111.49 (D4) | 143.47 (D7) | 122.18 |
Note:
Unmut, unmutated; Mut, mutated; WT, wild type; D, day, ND, not determined (as the absolute RFU values were nearly zero in both materials). The calculations can be seen in the accompanying raw data files (https://doi.org/10.5281/zenodo.13933534). Each measurement (RFU value) was compared with the mean of RFUs of biological replicates (n = 3) of conventional culture measured in the same patient and same day. This resulted in three percentual comparisons with conventional culture for each day. The median for each patient is a median of all these comparisons for each biological replicate (n = 3) of all four days (i.e., median of 3 × 4 = 12 comparisons in total). Median of a group of three patients is a median of 3 × 3 × 4 = 36 comparisons in total. Median of all (i.e., all 15 patients and their three comparisons for each of 4 days) is a median of 15 × 3 × 4 = 180 comparisons in total.