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. 2024 Nov 8;123(23):4123–4134. doi: 10.1016/j.bpj.2024.11.004

Table 2.

Parameters resulting from the least-squares fit of the SV samples

Model fit parameter SV Komorowski et al. SV Castorph et al. SV sucrose buffer SV TRIS buffer Unit
ρin,ρout 46.8 46.8 35.3 46.8 enm3
ρtail −28.8 −28.8 −40.3 −28.8 enm3
tin,tout 1.6 1.79 1.86 1.62 nm
ttail 2.33 2 0.96 1.07 nm
Rgin 2.51 2.86 2.3 1.7 nm
Rgout 4.38 5.3 4.8 5.01 nm
Ncin/(4π(RDRgin)2) 0.0179 0.0084 0.027 0.04 nm2
Ncout/(4π(R+Rgin)2) 0.00136 0.0009 0.00097 0.0009 nm2
ρc 52.1 52.1 40.6 52.1 enm3
R 16.95 16.95 16.95 16.95 nm
σR 3.92 3.92 3.92 3.92 nm
Amplitude 248.19 248.19 253.9 237.5 Arb. units
Rlarge 277.84 328.58 280.15 297.92 nm
σR,large 40.8 82.5 51.7 82.33 nm
Amplitudelarge 0.43 1.22 0.84 0.99 Arb. units
Scale 1.0097 0.0838 0.77 0.095
Constant background 0.00109 0.00019 0.0028 -9.66×10-6 1/mm
χred2 67.8 4.99 52.19 18.82

Fit results corresponding to the fits in Fig. 3, with the model described in (13,14). In the model, vesicles are described as polydisperse spherical particles with a mean radius R, standard deviation σ, and amplitude of the Gaussian distribution. To account for contamination by larger membranous particles, a second size distribution with radius Rlarge, width σlarge and amplitudelarge is introduced. The lipid bilayer is described by three Gaussians with amplitudes ρi, which describe the excess electron density (compared with water), while ti,i{in,out,tail} describe the width of the head and tail regions, respectively. The bilayer is assumed to be symmetric, i.e., tin=tout and ρin=ρout. The overall thickness of the bilayer is given by Db=2π(tin+ttail+tout). Proteins around the lipid bilayer are described by Gaussian chains with radius of gyration Rgi, copy number Nci,i{in,out}, and the electron density ρc. All electron densities are given as the density difference to the buffer solution. The parameters for the SV fractions from previous studies can be found in (14). Confidence intervals for the model parameters found in this study are given in the supporting material.