Table 3.
Peptide | Sequence | Allele | Predicted Affinity (nM) | Experimental Affinity (nM) |
---|---|---|---|---|
LN-1 | KMSYEDIEL | A02:01 | 71.69 | 110.7 |
LN-3 | ALNETSAIL | A02:01 | 67.47 | 64.02 |
LN-9 | GLDALNNLL | A02:01 | 66.44 | 111.9 |
HIV-RT | ILKEPVHGV | A02:01 | 40.85 | 63.81 |
LN-2 | MPKDGAAFI | B07:02 | 93.13 | 271.7 |
LN-7 | SVRGRLGAF | B07:02 | 66.44 | 325.5 |
MAGE2 | VPISHLYIL | B07:02 | 46.13 | 730.3 |
LN-8 | FPELKHFTM | B08:01 | 41.60 | 64 |
ELR-IAV | ELRSRYWAI | B08:01 | 6.53 | 143 |
NetMHCpan4.1 predicted and experimentally calculated affinity of indicated peptides to MHC class I.