Table 9.
Cluster | decoupleR (42) | Reference cell type |
---|---|---|
12 | Gamma-delta T cells | Gamma-delta T cells (gdT) |
13 | Dendritic Cells | Conventional Dendritic Cells 2 (cDC2) |
16 | Monocytes/Macrophages | CD16 Monocytes (CD16 Mono) |
17 | Plasmacytoid Dendritic Cells | Plasmacytoid Dendritic Cells (pDC) |
19 | Plasma Cells | Plasmablasts |
21 | B cells | B cell progenitor |
We performed ORA and used decoupleR (42) to identify the most likely cell type for each unknown cluster. In the last column, we show which cell type was matched in the reference dataset based on the ground truth annotations.