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. 2024 Dec 4;6(4):lqae166. doi: 10.1093/nargab/lqae166

Table 9.

Identification of cell types for the novel classes

Cluster decoupleR (42) Reference cell type
12 Gamma-delta T cells Gamma-delta T cells (gdT)
13 Dendritic Cells Conventional Dendritic Cells 2 (cDC2)
16 Monocytes/Macrophages CD16 Monocytes (CD16 Mono)
17 Plasmacytoid Dendritic Cells Plasmacytoid Dendritic Cells (pDC)
19 Plasma Cells Plasmablasts
21 B cells B cell progenitor

We performed ORA and used decoupleR (42) to identify the most likely cell type for each unknown cluster. In the last column, we show which cell type was matched in the reference dataset based on the ground truth annotations.