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. 2024 Dec 4;6(4):lqae156. doi: 10.1093/nargab/lqae156

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© The Author(s) 2024. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.

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Figure 4. — Unbaited fragment analysis. For the MAC-M0 CHi-C dataset, we selected two sets of unbaited fragments involved in either only balanced (light blue) or only unbalanced interactions (orange) and compared them with respect to length, GC and repeat content. (A) Fragment length distributions. (B) Fragment length distributions after removal of fragments <250 bp. (C) GC content distributions of fragment ends (120 bases from each end). (D) Distributions of the absolute differences in GC content of the two ends of given fragments. (E) Repeat content distributions of fragment ends. (F) Distributions of the absolute differences in repeat content of the two ends of given fragments.