Table 3.
Genotype and allele frequencies and diversity parameters of EGR1 SNPs.
| SNP | Genotype frequency (n) |
Allele Gene frequency |
P-value | Genetic polymorphism |
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | BB | AB | A | B | PIC | He | Ne | Ho | |||
| rs313414545 | 139(0.38) | 45(0.13) | 178(0.49) | 0.63 | 0.37 | 0.58 | 0.36 | 0.47 | 1.87 | 0.49 | |
| rs317658682 | 23(0.06) | 192(0.53) | 147(0.41) | 0.27 | 0.73 | 0.77 | 0.32 | 0.39 | 1.64 | 0.41 | |
| rs315634767 | 139(0.38) | 47(0.13) | 176(0.49) | 0.63 | 0.37 | 0.75 | 0.36 | 0.47 | 1.88 | 0.49 | |
| rs313977419 | 26(0.07) | 186(0.52) | 145(0.41) | 0.28 | 0.72 | 0.95 | 0.32 | 0.40 | 1.67 | 0.41 | |
EGR1 = early growth response protein 1; SNP = single-nucleotide polymorphism; PIC = polymorphism information content; Ho = observed heterozygosity; He = expected heterozygosity; Ne = effective number of alleles. P-value: Hardy–Weinberg equilibrium test, with P > 0.05 indicating that the population conforms to the Hardy–Weinberg equilibrium.