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. 2024 Dec 13;14:30460. doi: 10.1038/s41598-024-82115-1

Table 2.

Docking interaction parameters for C-4-Hydroxyphenylcalix[4] resorcinarene (HPCR) against four selected proteins.

Proteins S (energy score) RMSD_Refine* Interacting amino acid Type of interaction bond
3RJ3 -7.1127 1.0597

SER276

THR182

ARG122

H-acceptor

pi-H

H-acceptor

7AXD -6.1856 0.9183

LEU335

THR182

LYS331

H-donor

pi-H

Ionic

6DUK -7.3611 1.224

ARG803

ARG841

GLY874

H-acceptor

Ionic

H-acceptor

1CGL -5.6105 1.619

GLU247

ASP245

LYS136

LYS136

H-donor

H-donor

Ionic

pi-H

*RMSD_Refine: the root-mean-squared-deviation (RMSD) between the predicted pose and those of the crystal one (after and before refinement process, respectively).