TABLE 1.
Exposure | Outcome | Ancestor | Method | nSNP | Cochran’s Q test | Intercept term | Global test | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Q | Q_df | p | Intercept | SE | p | RSSobs | p | |||||
NAFLD | GERD | European | MR Egger | 8 | 33.706 | 6 | 7.67E-06 | 0.011 | 0.011 | 0.377 | ||
IVW | 8 | 38.817 | 7 | 2.12E-06 | ||||||||
MR-PRESSO | 8 | 48.486 | <0.001 | |||||||||
NAFLD | GERD (adjusted) | European | MR Egger | 6 | 3.173 | 4 | 0.529 | 0.002 | 0.005 | 0.689 | ||
IVW | 6 | 3.358 | 5 | 0.645 | ||||||||
MR-PRESSO | 6 | 4.992 | 0.690 | |||||||||
Percent liver fat | GERD | European | MR Egger | 6 | 6.174 | 4 | 0.186 | −0.005 | 0.005 | 0.399 | ||
IVW | 6 | 7.547 | 5 | 0.183 | ||||||||
MR-PRESSO | 6 | 14.770 | 0.337 | |||||||||
GERD | NAFLD | European | MR Egger | 76 | 114.444 | 74 | 0.002 | −0.014 | 0.015 | 0.357 | ||
IVW | 76 | 115.772 | 75 | 0.002 | ||||||||
MR-PRESSO | 76 | 118.842 | 0.001 | |||||||||
GERD | NAFLD (adjusted) | European | MR Egger | 72 | 79.812 | 70 | 0.198 | −0.021 | 0.013 | 0.100 | ||
IVW | 72 | 82.980 | 71 | 0.156 | ||||||||
MR-PRESSO | 72 | 85.289 | 0.170 | |||||||||
GERD | Percent liver fat | European | MR Egger | 38 | 81.940 | 75 | 0.273 | 0.006 | 0.006 | 0.299 | ||
IVW | 38 | 83.132 | 76 | 0.269 | ||||||||
MR-PRESSO | 38 | 85.376 | 0.315 | |||||||||
ALT | GERD | East Asian | MR Egger | 25 | 21.554 | 23 | 0.547 | 0.004 | 0.034 | 0.909 | ||
IVW | 25 | 21.568 | 24 | 0.605 | ||||||||
MR-PRESSO | 25 | 23.326 | 0.614 | |||||||||
AST | GERD | East Asian | MR Egger | 22 | 11.327 | 20 | 0.937 | −0.001 | 0.033 | 0.977 | ||
IVW | 22 | 11.328 | 21 | 0.956 | ||||||||
MR-PRESSO | 22 | 12.578 | 0.953 | |||||||||
GERD | ALT | East Asian | MR Egger | 34 | 54.175 | 29 | 0.008 | 0.002 | 0.004 | 0.674 | ||
IVW | 34 | 54.480 | 30 | 0.011 | ||||||||
MR-PRESSO | 34 | 57.828 | 0.013 | |||||||||
GERD | ALT (adjusted) | East Asian | MR Egger | 33 | 39.567 | 31 | 0.139 | 0.001 | 0.003 | 0.834 | ||
IVW | 33 | 39.624 | 32 | 0.166 | ||||||||
MR-PRESSO | 33 | 42.202 | 0.187 | |||||||||
GERD | AST | East Asian | MR Egger | 34 | 45.051 | 32 | 0.063 | 0.002 | 0.004 | 0.656 | ||
IVW | 34 | 45.335 | 33 | 0.075 | ||||||||
MR-PRESSO | 34 | 48.131 | 0.056 |
SNPs, single nucleotide polymorphisms; SE, standard error; p, p-value; IVW, inverse variance weighted; PRESSO, Pleiotropy RESidual Sum and Outlier; NAFLD, non-alcoholic fatty liver disease; GERD, gastroesophageal reflux disease; ALT, alanine aminotransferase; AST, aspartate aminotransferase.