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Behavior of TMD of LMP1 in MD simulations showing replicate 1 RMSD has a lower threshold compared to replicates 2 and 3. Replicate 1 is in blue, replicate 2 is in orange, and replicate 3 is in black. (a) RMSD graph. (b) RMSF graph. (c) Radius of gyration (Rg) plot.
