Table 4.
Primer information for physiological races of vegetable soil borne diseases.
| Disease | Marker name | Primer sequence (5′-3′) | Fragment size (bp) |
|---|---|---|---|
| Root rot (Fusarium sp.) | Routine PCR | uni-F:ATCATCTTGTGCCAACTTCAG | 670 |
| uni-R:GTTTGTGATCTTTGAGTTGCCA | |||
| sprl-F:GATGGTGGAACGGTATGACC | 947 | ||
| sprl-R:CCATCACACAAGAACACAGGA | |||
| sp13-F:GTCAGTCCATTGGCTCTCTC | 445 | ||
| sp13-R:TCCTTGACACCATCACAGAG | |||
| sp23-F:CCTCTTGTCTTTGTCTCACGA | 518 | ||
| sp23-R:GCAACAGGTCGTGGGGAAAA | |||
| Fo-1F:CTGCCCGCTGGGAACAAGCT | 1873 | ||
| Fo-3R:CTTAACCGTTGAACTTTCTAAC | |||
| ITS1:TCCGTAGGTGAACCTGCGG | 544 ~ 568 | ||
| ITS4:TCCTCCGCTTATTGATATGC | |||
| FORL_KASP | FORL-FAM-f:GAAGGTGACCAAGTTCATGCTATGGTGGAACGGTATGACC | ||
| FORL-HEX-h:GAAGGTCGGAGTCAACGGATTATGGTGGAACGGTATGACT | |||
| FORL-c:AAGAATCTCCTTGCCGGCAAACTCTGCATA | |||
| FOLrace1_KASP | FOLrace1-FAM-f:GAAGGTGACCAAGTTCATGCTCCTTGAACGAGATGTCCTTGGCTAG | ||
| FOLrace1-HEX-h:GAAGGTCGGAGTCAACGGATTCCTTGAACGAGATGTCCTTGGCTAC | |||
| FOLrace1-c:GTCGTCACCTGTAAGGAACCCT | |||
| FOLrace2_KASP | FOLrace2-FAM-f:GAAGGTGACCAAGTTCATGCTGTCCTTGAAGTGAACTCCC | ||
| FOLrace2-HEX-h:GAAGGTCGGAGTCAACGGATTGTCCTTGAAGTGAACTCCT | |||
| FOLrace2-c:TCCGACCTATTCTGTTCTATGCT | |||
| FOLrace3_KASP | FOLrace3-FAM-f:GAAGGTGACCAAGTTCATGCTTTGTGTTAGTGCTACTAGTGCGGCA | ||
| FOLrace3-HEX-h:GAAGGTCGGAGTCAACGGATTTTGTGTTAGTGCTACTAGTGCGGCG | |||
| FOLrace3-c:TAACCTTGAAAGGGCTCGCAGAAGCCTGAG | |||
| Bacterial wilt (Ralstonia solanacearum) | lpx C | RS72F:ATGGATAAAGGGTTCGTGGTG | 241 |
| RS312R:CAGGCTCAGCGAGATTGC | |||
| Club root (Plasmodiophora brassicae) | Cr811 | ActF:GGGACATCACCGACTACCTG | 492 |
| ActR:ACTGCTCCGAGTTGGACATC | |||
| PBRA | 007750-1-F:CTTCGTGCTGACCGATTCCT | 638 | |
| 007750-1-R:ATAATGCTCTGCGTCAGCCA | |||
| 009348-1-F:CACTGCTATCGTCTCCCTGG | 509 | ||
| 009348-1-R:CCTGCAATGTTTCGCTGCAA | |||
| 008439-1-F:TCGGCGACCTGAGCGAGAA | 651 | ||
| 008439-1-R:TCAACATGCGCATAGTAC | |||
| l342-1-F:TCCTCTTGAACCGACACTGC | 249 | ||
| l342-1-R:CTTCTCTCGCACTAGCCAGG |