Table 1.
Summary of the chloroplast genomesof 28 Ardisia species
Species | Genome Length (bp) | LSC Length (bp) | SSC Length (bp) | IR Length (bp) | GC (%) | Total Genes | CDS | t RNA |
rRNA |
---|---|---|---|---|---|---|---|---|---|
A. argenticaulis | 156,940 | 86,068 | 18,400 | 26,236 | 37.03% | 131 | 87 | 36 | 8 |
A. balansana | 155,307 | 85,673 | 18,342 | 25,646 | 37.21% | 132 | 88 | 36 | 8 |
A. bullata | 155,088 | 84,709 | 18,367 | 26,006 | 36.00% | 132 | 88 | 36 | 8 |
A. carnosicaulis | 156,548 | 86,102 | 18,346 | 26,050 | 37.05% | 131 | 87 | 36 | 8 |
A. crenata | 156,540 | 86,093 | 18,347 | 26,050 | 37.10% | 132 | 87 | 36 | 8 |
A. crispa | 156,709 | 86,300 | 18,411 | 25,999 | 37.06% | 131 | 87 | 36 | 8 |
A. faberi | 156,104 | 86,989 | 18,293 | 25,411 | 36.96% | 130 | 85 | 37 | 8 |
A. fordii | 156,999 | 86,131 | 18,404 | 26,232 | 37.02% | 132 | 88 | 36 | 8 |
A. gigantifolia | 156,216 | 85,725 | 18,397 | 26,047 | 37.30% | 131 | 87 | 36 | 8 |
A. japonica | 155,787 | 86,715 | 18,222 | 25,457 | 37.05% | 130 | 85 | 37 | 8 |
A. lindleyana | 156,741 | 86,359 | 18,380 | 26,001 | 37.06% | 131 | 87 | 36 | 8 |
A. maclurei | 155,751 | 86,725 | 18,104 | 25,467 | 37.02% | 129 | 85 | 36 | 8 |
A. mamillata | 156,757 | 86,325 | 18,434 | 25,999 | 37.10% | 131 | 87 | 36 | 8 |
A. merrillii | 156,746 | 86,351 | 18,387 | 26,004 | 37.08% | 131 | 87 | 36 | 8 |
A. nutantiflora | 156,542 | 86,225 | 18,379 | 25,969 | 37.22% | 132 | 88 | 36 | 8 |
A. obtusa | 156,626 | 86,168 | 18,346 | 26,056 | 37.07% | 131 | 87 | 36 | 8 |
A. omissa | 156,761 | 86,335 | 18,428 | 25,999 | 37.05% | 132 | 87 | 37 | 8 |
A. pedalis | 156,722 | 86,301 | 18,405 | 26,008 | 37.05% | 132 | 87 | 37 | 8 |
A. perreticulata | 156,953 | 86,084 | 18,413 | 26,228 | 37.03% | 131 | 87 | 36 | 8 |
A. polysticta | 156,506 | 86,078 | 18,328 | 26,050 | 37.07% | 131 | 87 | 36 | 8 |
A. primulifolia | 156,728 | 86,318 | 18,402 | 26,004 | 37.05% | 131 | 87 | 36 | 8 |
A. pseudocrispa | 156,744 | 86,354 | 18,308 | 25,999 | 37.04% | 131 | 87 | 36 | 8 |
A. pusilla | 155,749 | 86,677 | 18,222 | 25,425 | 37.05% | 129 | 85 | 36 | 8 |
A. quinquegona | 156,766 | 85,900 | 18,408 | 26,229 | 37.05% | 131 | 87 | 36 | 8 |
A. replicata | 156,278 | 86,012 | 18,358 | 26,196 | 37.20% | 132 | 88 | 36 | 8 |
A. sieboldii | 156,923 | 85,982 | 18,479 | 25,954 | 37.04% | 132 | 88 | 36 | 8 |
A. solanacea | 156,518 | 86,033 | 18,093 | 26,231 | 37.14% | 132 | 88 | 36 | 8 |
A. villosa | 156,720 | 86,353 | 18,339 | 26,014 | 37.07% | 131 | 87 | 36 | 8 |
LSC large single-copy, SSC small single-copy, IR inverted repeat