AMP |
ANTIMICROBIAL PEPTIDES |
ML |
Machine Learning |
STFT |
Short time Fourier transform |
DL |
Deep Learning |
MIC |
Minimum Inhibitory Concentrations |
APD |
Antimicrobial Peptide Database |
CNN |
Convolutional neural networks |
RNN |
Recurrent neural networks |
DRAMP |
Dragon Antimicrobial Peptide Database |
CAMPR3 |
Cationic Antimicrobial Peptides Repository Version 3 |
MARVIN |
Molecular Modeling and Visualization of Interactions in Neuropeptides |
PCA |
Principal component analysis |
NN |
Neural Network |
KNN |
K Nearest Neighbor |
NLP |
Natural language processing |
Conv |
Convolution Layer |
RELU |
rectified linear unit |
Pool |
Pooling Layer |
FC |
Fully connected |
VGG |
Visual Geometry Group |
ResNET |
Residual Networks |
ROC |
Receiver Operating Characteristic |
FN |
False Negatives |
FP |
False Positive |
TP |
True Positive |
TN |
True Negative |
DLP |
Deep learning prediction |
MCC |
Matthews correlation coefficient |
AUC |
Area under the curve |
ACPs |
Antimicrobial Cationic Peptides |