Antibodies |
|
Mouse monoclonal anti-β-actin |
Abcam |
Cat#ab6276; RRID: AB_2223210
|
Rabbit monoclonal anti-SPARC |
Abcam |
Cat#ab207743; RRID: AB_2924283
|
|
Bacterial and virus strains |
|
Lv-miR-532-3p |
Genechem |
N/A |
Lv-sponge-miR-532-3p |
Genechem |
N/A |
|
Biological samples |
|
Bile samples |
Peking university cancer hospital (China) |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
Oxaliplatin |
MedChemexpress |
Cat#HY-17371 |
5-fluorouracil |
MedChemexpress |
Cat#HY-90006 |
|
Critical commercial assays |
|
High-throughput sequencing of miRNAs and mRNAs |
CloudSeq Biotech Inc |
N/A |
Lipofectamine RNAiMAX |
Invitrogen |
Cat#13778030 |
Lipofectamine 3000 |
Invitrogen |
Cat#L3000001 |
MicroRNA Reverse Transcription Kit |
EZBioscience |
Cat#EZB-miRT3 |
PrimeScript™ RT Reagent Kit |
Takara Bio USA |
Cat#RR037A |
bicinchoninic acid protein assay kit |
Servicebio |
Cat#G2026-200T |
ECL Plus Western Blotting Detection Reagents |
Solarbio |
Cat#PE0010 |
Counting Kit-8 (CCK-8) kit |
Solarbio |
Cat#CA1210 |
Trizol reagent |
Thermo Fisher |
Cat#15596018CN |
|
Deposited data |
|
miRNA-seq count data |
This paper |
https://data.mendeley.com/datasets/6rx2k6xhjg/2 |
mRNA-seq count data |
This paper |
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280797 |
|
Experimental models: Cell lines |
|
QBC939 cells |
Qingqi (Shanghai) Biotechnology development Co., LTD |
Cat#BFN60810642 |
FRH0201 cells |
Otwo Biotech |
Cat#HTX2093 |
293T cell line |
Cell Bank of the Chinese Academy of Sciences |
SCSP-502 |
|
Oligonucleotides |
|
See Table S1 for sequences of miRNA mimics, inhibitor, and siRNA |
N/A |
N/A |
See Table S2 for primer sequences in qPCR |
N/A |
N/A |
|
Recombinant DNA |
|
pcDNA3.1-secreted protein acidic and rich in cysteine (SPARC) |
Genechem |
N/A |
control vector plasmids |
Genechem |
N/A |
|
Software and algorithms |
|
SPSS 20.0 software |
IBM |
https://www.ibm.com/support/pages/spss-statistics-20-available-download |
GraphPad Prism 9 |
GraphPad Software |
https://www.graphpad.com/scientific-software/prism/ |