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. 2005 Jun 16;102(26):9127–9132. doi: 10.1073/pnas.0500081102

Table 1. Properties of DNA molecules used.

DNA N, bp* Lc, μm Rg, nm Nb,§ τ1, ms Δt, ms
φX174** 5,386 1.8 175 1.4 2.6 21
8,000 2.7 213 2.0 4.8 21
T7/BstEII 20,065/19,871†† 6.8 336 5.0 19 26
T7 39,936 13.6 476 10.1 53 27
T4 166,000 56.4 970 41.8 450 52
*

Degree of polymerization.

Contour length; Lc = 0.34 nm·N.

Radius of gyration; Rg = (PLc/3)1/2 with a persistence length of P = 50 nm.

§

Number of DNA blobs in nanotube of radius R = 150 nm. Nb = N/n, where n = 3,970 is the number of bp per blob in a cylindrical tube, obtained from the condition that the blob radius-of-gyration equals the tube radius.

Longest relaxation time of unconfined polymer. Confinement will increase the relaxation time as described in the text.

Experimental average transit time across detection volume.

**

Linear form obtained by restriction cleavage of circular form by Eco 1471. The uncleaved sample contained >90% nicked circular form.

††

Two fragments in equimolar amounts obtained by restriction cleavage of T7 DNA by BstEII. Calculations and plots are based on the mean N.