Table 3.
Annotations of 5% Bonferroni genome-wide significant and suggestive-level SNPs associated with slow myofiber numbers (SM%).
| SNP1 | Position2 | Alt/Ref3 | P-value | Location | Candidate/Surrounding gene (100 kb)4 |
|---|---|---|---|---|---|
| rs736451963 | 1:114556280 | T/A | 3.80E-8 | intron | DMD |
| rs314441718 | 1:112778555 | C/T | 2.37E-7 | intron | MID1IP1 |
| rs314806781 | 1:112778583 | A/G | 1.28E-7 | intron | MID1IP1 |
| rs317158254 | 1:114561947 | C/T | 1.24E-6 | intron | DMD |
| rs15392642 | 1:114562726 | C/T | 8.43E-7 | intron | DMD |
| rs312575899 | 1:114562804 | T/C | 6.83E-7 | intron | DMD |
| rs15392647 | 1:114566874 | A/G | 2.28E-6 | intron | DMD |
| rs313949350 | 1:114584695 | T/C | 1.78E-6 | intron | DMD |
| rs738093891 | 1:114594712 | G/A | 2.39E-7 | intron | DMD |
| rs13668302 | 2:33529776 | A/G | 1.24E-6 | intron | CHN2 |
| 7:11802820 | A/G | 2.19E-6 | downstream | METTL21A | |
| 7:11802820 | A/G | 2.19E-6 | downstream | CREB1 | |
| rs739533409 | 9:6475388 | T/C | 2.06E-6 | intron | PXYLP1 |
| rs733424755 | 9:6475392 | C/T | 2.30E-6 | intron | PXYLP1 |
| rs738453647 | 9:6477588 | T/C | 9.97E-7 | intron | PXYLP1 |
| rs313304726 | 9:6477645 | A/G | 2.30E-6 | intron | PXYLP1 |
| rs737019788 | 9:6478235 | A/G | 8.62E-7 | intron | PXYLP1 |
| 9:6479187 | T/C | 7.75E-7 | intron | ENSGALG00010011362 |
1
SNP: rs ID of the locus
2
Position: Physical location of the SNP (chromosome: position).
3
Alt/Ref: Alternative allele and reference allele.
4
Candidate/Surrounding gene (100 kb): Genes annotated in the 100 kb region upstream and downstream of the SNP