Table 4.
Annotations of 5% Bonferroni genome-wide significant and suggestive-level SNPs associated with area percentage of slow myofibers (SMA%).
| SNP1 | Position2 | Alt/Ref3 | P-value | Location | Candidate/Surrounding gene (100 kb)4 |
|---|---|---|---|---|---|
| rs314708444 | 5:43140218 | G/A | 3.64E-8 | downstream | EFCAB11 |
| 2:63027523 | C/T | 1.85E-6 | intron | TFAP2A | |
| 3:12873236 | A/C | 1.10E-6 | intron | ENSGALG00010019286 | |
| rs317587148 | 5:43140058 | G/A | 1.29E-6 | downstream | EFCAB11 |
| rs15940870 | 8:28402606 | C/G | 1.05E-6 | regulatory region | ENSGALR00000432893 |
| 11:8108098 | C/T | 8.31E-7 | downstream | CCNE1 | |
| rs738833579 | 15:7987459 | A/G | 8.74E-7 | intron | MMP11 |
| 15:7988165 | T/C | 4.02E-7 | intron | MMP11 | |
| 15:7988199 | C/A | 4.20E-7 | intron | MMP11 | |
| 15:7988202 | G/A | 4.20E-7 | intron | MMP11 | |
| 15:8019698 | T/C | 1.48E-6 | upstream | DERL3 | |
| rs431888656 | 19:4735002 | C/T | 7.81E-7 | intron | YWHAG |
1
SNP: rs ID of the locus
2
Position: Physical location of the SNP (chromosome: position).
3
Alt/Ref: Alternative allele and reference allele.
4
Candidate/Surrounding gene (100 kb): Genes annotated in the 100 kb region upstream and downstream of the SNP