Table 2.
SNPs | Chr.position | Alleles | MAF in dbSNP | MAF | HWE (P value) | Functions | ||
---|---|---|---|---|---|---|---|---|
Control group | Case group | Control group | Case group | |||||
rs3765468 | 39065817 | G > A | 0.09 | 0.092 | 0.197 | 0.377 | 0.487 | Synonymous-codon |
rs3765467 | 39065819 | G > A | 0.04 | 0.178 | 0.303 | 0.755 | 0.602 | Nonsynon missense |
rs4714210 | 39087709 | A > G | 0.24 | 0.211 | 0.355 | 0.799 | 0.481 | Non-coding transcript variant |
rs10305420 | 39048860 | C > T | 0.17 | 0.138 | 0.184 | 0.597 | 0.748 | Missense |
rs10305445 | 39058761 | C > T | 0.18 | 0.053 | 0.053 | 0.628 | 0.000 | Intron-variant |
rs761386 | 39079095 | C > T | 0.16 | 0.151 | 0.105 | 0.120 | 0.305 | Upstream-variant |
rs761387 | 39078425 | A > G | 0.20 | 0.158 | 0.118 | 0.102 | 0.942 | Non-coding transcript variant |
SNPs, single nucleotide polymorphisms; MAF, minimum allele frequency; dbSNP, the Genetic Variation Database of NCBI; HWE, Hardy-Weinberg equilibrium