TABLE 2.
Gene contents in the I. verum cp genome.
| Category for genes | Group of genes | Name of genes |
|---|---|---|
| Transcription and translation-related genes | transfer RNAs | trnH-GUG, trnK-UUU, trnQ-UUG, trnS-GCU, trnG-UCC, trnR-UCU, trnC-GCA, trnD-GUC, trnY-GUA, trnE-UUC, trnT-GGU, trnS-UGA, trnG-GCC, trnfM-CAU, trnS-GCU, trnT-UGU, trnL-UAA, trnF-GAA, trnV-UAC, trnM-CAU, trnW-CCA, trnP-GGG, trnI-CAU, trnL-CAA, trnV-GAC, trnI-GAU, trnA-UGC, trnR-ACG, trnN-GUU, trnL-UAG, trnN-GUU, trnR-ACG, trnA-UGC, trnI-GAU, trnV-GAC |
| RNA polymerase | rpoC1, rpoC2, rpoA, rpoB | |
| ribosomal proteins(SSU) | rps2, rps3, rps4, rps7, rps8, rps11, rps12, rps14, rps15, rps16 rps18, rps19, | |
| ribosomal proteins(LSU) | rpl2, rpl14, rpl16, rpl20, rpl22, rpl23, rpl32, rpl33, rpl36 | |
| Translational initiation factor | infA | |
| ribosomal RNAs | rrn4.5, rrn5, rrn16, rrn23 | |
| Photosynthesis-related genes | NADH dehydrogenase | ndhA, ndhB, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| photosystem I | psaA, psaB, psaC, psaI, psaJ | |
| photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbJ, psbK, psbM, psbN, psbT, psbZ | |
| cytochrome b/f complex | petA, petB, petD, petG, petL, petN | |
| RubisCO | rbcL | |
| ATP synthase | atpA, atpB, atpE, atpF, atpH, atpI | |
| hypothetical chloroplast | ycf1, ycf2, ycf3, ycf4 | |
| Other genes | Maturase | matK |
| Protease | clpP | |
| Envelope membrane protein | cemA | |
| Subunit of Acetyl-CoA carboxylase | accD | |
| C-type cytochrome synthesis gene | ccsA |