Table 1. Top five DE lncRNAs and their potentially regulated genes in continuously up-regulated profile 12 based on short time-series expression miner (STEM) analysis.
LncRNA | F90 (FPKM) | L30 (FPKM) | A3Y (FPKM) | Target gene of lncRNA |
TCONS_00 330 276 | 746.26 | 3 311.85 | 26 624.87 | TNNC2, SPINT4, ZNF335, PCIF1, WFDC3 |
TCONS_00 783 895 | 482.22 | 816.04 | 2 801.51 | FMO1, SALL4, NOD2, IL7R, TARSL2 |
TCONS_00 838 251 | 105.18 | 254.69 | 965.04 | LPIN2, MYOM1 |
TCONS_00 389 861 | 95.90 | 340.59 | 2 750.72 | ACTN4, MAP4K1, EIF3K, RYR1, RASGRP4 |
TCONS_01 105 309 | 42.83 | 169.98 | 1 076.83 | PPP1R3A |