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. 2002 May 14;3(6):research0027.1–research0027.16. doi: 10.1186/gb-2002-3-6-research0027

Table 3.

Primers used for the generation and verification of yeast single knockouts

Oligonucleotides for the synthesis of kanMX4 cassettes
Primer Sequence 5' to 3'
 YGR038w F AGG AAC TGC TGA GGC GGC TTC TAC CTC GTA TAG TCG AAA TCA AAC CGT ACG CTG CAG GTC GAC
 YGR038w R TGT TCA ACT AAT TTG GGC GCG ACC TGT GAT ACC TGG GAT AGA AAT ATC GAT GAA TTC GAG CTC G
 YLR350w F ATC ATG ATT GAC CGC ACT AAA AAC GAA TCT CCA GCT TTT GCG TAC GCT GCA GGT CGA C
 YLR350w R CTA ACT AAT TTG AGC ACG GCC CGT AAT ACC AGG GAT GGA TAT CGA TGA ATT CGA GCT CG
Oligonucleotides for gene integrity and gene deletion verification

Verification of ORM1 gene integrity
 A1 (F) GTT TAG GAA CGG ATT ATA GA
 A2 (R) CTG GTC ATT TTC ATC TTC AA
Verification of ORM1 substitution
 A1 (F) GTT TAG GAA CGG ATT ATA GA
 KAN5 (R) GTT CGG ATG TGA TGT GAG
Verification of ORM2 gene integrity
 YLR350w up400 (F) GCG TAT TTT GAT TGC TCA TA
 YLR350w ver (R) TGG TTT CAG GTT AGA CAC AT
Verification of ORM2 substitution
 YLR350w up400 (F) GCG TAT TTT GAT TGC TCA TA
 KAN5 (R) GTT CGG ATG TGA TGT GAG

Oligonucleotides in bold are 18-19 nucleotide homology regions to pFA6a MCS sequences.