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. 2024 Dec 27;29:159. doi: 10.1186/s11658-024-00675-6

Table 1.

Integrating metabolomics and transcriptomics for KEGG pathway enrichment and relevant genes

Pathway p-Value Corrected p-value Gene symbol
Gap junction 0.038993 0.074212 TUBB6|PDGFD|PRKACB
Autophagy—animal 0.00489 0.019897* IGF1R|DDIT4|EIF2AK3|HIF1A|PRKACB
Phosphatidylinositol signaling system 0.200611 0.255915 PIK3C2B|DGKG
Phospholipase D signaling pathway 0.008727 0.028197* CYTH3|RAPGEF3|PDGFD|DGKG|IGH
Sphingolipid signaling pathway 0.260831 0.315672 S1PR5|TNFRSF1A
Choline metabolism in cancer 0.001694 0.010158* CHPT1|PDGFD|DGKG|HIF1A|FOS
Pathways in cancer 1.37E-05 0.000323** CDKN2B|IGF1R|FOS|GNB4|PRKACB|RXRA|HIF1A|SMAD3|IL6|DLL1|JUP|ARAF|CDK6|IL15|LEF1|MYC
Insulin resistance 0.063329 0.104514 IL6|SOCS3|TNFRSF1A
Pathogenic Escherichia coli infection 0.369197 0.410993 TUBB6
Inositol phosphate metabolism 0.460569 0.485242 PIK3C2B
Metabolic pathways 0.210821 0.263247 PLD4|CD38|GCNT1|GPT2|AASS|NT5E|HACD1|PIK3C2B|MGAT3|RRM2|CHDH|CHPT1|LARGE1|DGKG|CSGALNACT1
Glycerophospholipid metabolism 0.04923 0.086061 PLD4|CHPT1|DGKG
Glycerolipid metabolism 0.094317 0.147409 MGAT3|DGKG
Ether lipid metabolism 0.008024 0.027446* PLD4|CHPT1|ENPP2
Sphingolipid metabolism 0.363591 0.415781 SGPP2
Fat digestion and absorption 0.048439 0.085311 SCARB1|MGAT3
Vitamin digestion and absorption 0.185855 0.240998 SCARB1
Regulation of lipolysis in adipocytes 0.369197 0.410993 PRKACB
Retrograde endocannabinoid signaling 0.036793 0.071173 GNAO1|GABRB2|GNB4|PRKACB
Long-term depression 0.015044 0.03859 GNAO1|IGF1R|ARAF

The blod values means statistically significant. *p < 0.05, **p < 0.01