Table 3.

Retained, putatively functional genes in Wullschlaegelia calcarata, separated by basic functional groups.

Gene class	Genes retained in Wullschlaegelia calcarata
Photosynthesis	–
ATP synthesis	–
Transcription, translation	infA, rpl2*, rpl14, rpl16*, rpl20, rpl36, rps2, rps3, rps4, rps7, rps8, rps11, rps12***, rps14, rps15, rps18, rps19
Ribosomal RNA	rrn4.5, rrn5, rrn16, rrn23
Transfer RNA	trnC-GCA, trnE-UUC, trnfM-CAU, trnM-CAU, trnQ-UUG, trnW-CCA, trnY-GUA
Other	accD, clpP**, matK, ycf1, ycf2

–, No genes detected; *, contains one intron; **, contains two introns (i.e. clpP); ***, contains two cis-spliced and one trans-spliced exon (i.e. rps12).