Table 1.
Top 20 up- and down-regulated genes identified in DEG analysis. The table shows symbols of the genes, log 2FC, and description of top DEGs
| Upregulated genes in LNCaP cell lines as compared to DU145 cell lines. | Down-regulated genes in LNCaP cell lines as compared to DU145 cell lines | ||||
|---|---|---|---|---|---|
| Symbols | Log2 FC | Description | Symbols | Log2 FC | Description |
| SCN1A | 8.03 | sodium voltage-gated channel alpha subunit 1 | HSPA6 | -8.94 | heat shock protein family A (Hsp70) member 6 |
| MAP2K6 | 5.58 | mitogen-activated protein kinase kinase 6 | IL24 | -6.39 | interleukin 24 |
| CP | 5.15 | ceruloplasmin | NGFR | -5.37 | nerve growth factor receptor |
| ALDH3B2 | 5.07 | aldehyde dehydrogenase 3 family member B2 | NEURL3 | -5.15 | neuralized E3 ubiquitin protein ligase 3 |
| BCO1 | 4.89 | beta-carotene oxygenase 1 | TMEM158 | -5.07 | transmembrane protein 158 |
| FGB | 4.76 | fibrinogen beta chain | HMGA2 | -5.05 | high mobility group AT-hook 2 |
| MAML2 | 4.58 | mastermind like transcriptional coactivator 2 | COX6B2 | -4.64 | cytochrome c oxidase subunit 6B2 |
| FGA | 4.57 | fibrinogen alpha chain | PIK3CG | -4.63 | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma |
| FGG | 4.51 | fibrinogen gamma chain | DUSP15 | -4.45 | dual specificity phosphatase 15 |
| CRLF1 | 4.44 | cytokine receptor like factor 1 | FOXS1 | -4.45 | forkhead box S1 |
| SFTPB | 4.36 | surfactant protein B | PLPP4 | -4.33 | phospholipid phosphatase 4 |
| B3GNT7 | 4.33 | UDP-GlcNAc: betaGal beta-1,3-N-acetylglucosaminyltransferase 7 | U2AF1 | -4.31 | U2 small nuclear RNA auxiliary factor 1 |
| FN1 | 4.21 | fibronectin 1 | TBX2 | -4.30 | T-box transcription factor 2 |
| ST6GALNAC3 | 4.21 | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 | KCNMA1 | -4.28 | potassium calcium-activated channel subfamily M alpha 1 |
| TET1 | 4.20 | tet methylcytosine dioxygenase 1 | HES7 | -4.10 | hes family bHLH transcription factor 7 |
| FXYD2 | 4.18 | FXYD domain containing ion transport regulator 2 | HIGD2B | -3.98 | HIG1 hypoxia inducible domain family member 2B |
| FXYD6 | 4.18 | FXYD domain containing ion transport regulator 6 | CHST1 | -3.97 | carbohydrate sulfotransferase 1 |
| FXYD6-FXYD2 | 4.18 | FXYD6-FXYD2 readthrough | MIOX | -3.90 | myo-inositol oxygenase |
| GPR68 | 4.10 | G protein-coupled receptor 68 | CCNA1 | -3.86 | cyclin A1 |
| TGFB3 | 4.06 | transforming growth factor beta 3 | CHST8 | -3.84 | carbohydrate sulfotransferase 8 |