Table 1.

Summary of data and tools that could be browsed and used for the eight orchid species (Pha. Equestris, D. catenatum, Apo. Shenzhenica, P. zijinensis, P. guangdongensis, C. sinense, C. Ensifolium and C. Goeringii)

Transcriptome	Gene ID, FPKM and TPM values in various tissues
Genome browser	Scaffold ID, Scaffold sequence, Gene model, miRNA
Gene annotation	Gene ID, Gene sequence, BLAST top hit descriptions, KEGG pathway, GO terms, Interpro description, Swissprot description, TrEMBL description, miRNA
Metabolism pathway	Gene ID, Genes mapped to the KEGG pathways
Synteny	Gene ID, Physical positions of genes
Gene order	Gene ID, Physical positions of genes
miRNA-targets information	miRNA gene ID, Structure of miRNA, Target gene IDs of miRNA, Binding sites in the target genes of a miRNA
Regulation	Gene ID, Promoter binding site prediction
Tools	BLASTN, BLASTX, tBLASTX, BLASTP, tBLASTN, pfam ID, pfam description,