TABLE 4.
Comparing low-res and high-res approaches of pathology feature extraction and aggregation demonstrates higher performance with the high-res approach that uses CONCH-selected patches with a normalized cancer similarity score >= 0.9
Model name | Path. Feat. | five-fold ROC-AUC | 95% Confidence interval |
---|---|---|---|
| |||
Training MLP with pathology informed CT biomarkers | |||
Dinov2-Corrfeat-Avg-Low-res | Low-res | 0.796 ± 0.018 | (0.714, 0.907) |
Dinov2-Corrfeat-Avg | High-res | 0.815 ± 0.007 | (0.725, 0.910) |
BiomedCLIP-Corrfeat-Avg-Low-res | Low-res | 0.771 ± 0.022 | (0.672, 0.898) |
BiomedCLIP-Corrfeat-Avg | High-res | 0.794 ± 0.007 | (0.703, 0.914) |
Bold values indicate best performance.
Note: The five-fold ROC-AUC values are reported as mean ± standard deviation across the five-folds.
Abbreviations: CONCH, CONtrastive learning from Captions of Histopathology; MLP, multi-layer perceptron; ROC-AUC, area under the receiver operating characteristics curve.