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. 2024 Dec 12;24(1):94–110. doi: 10.1021/acs.jproteome.4c00444

Table 1. Common Proteins between Different Peribacteroid Space Isolated EVs of S. fredii HH103 and R. tropici CIAT 899 According to Their B2Go Protein Descriptiona.

SeqName B2Go description GO annotations
S. fredii HH103 shared proteins detected in EVs isolated from soybean and L. burttii
CCE96230.1 lipid A biosynthesis lauroyl acyltransferase C: plasma membrane; P: glycolipid biosynthetic process; F: acyltransferase activity
CCE97634.1 F0F1 ATP synthase subunit β F: ATP binding; C: plasma membrane; P: proton motive force-driven ATP synthesis; F: ATP hydrolysis activity; C: proton-transporting ATP synthase complex, catalytic core F(1); F:proton-transporting ATP synthase activity, rotational mechanism; F: proton-transporting
CCE99650.1 DNA ligase D F: DNA binding; F: DNA-directed DNA polymerase activity; F: DNA ligase (ATP) activity; F: exonuclease activity; F: ATP binding; P: DNA repair; P: DNA recombination; P: DNA biosynthetic process
CCF00065.1 CmpA/NrtA family ABC transporter substrate-binding protein  
CCE96218.1/CCE96988.1 PAS domain S-box protein F: phosphorelay sensor kinase activity; P: phosphorelay signal transduction system; F: calmodulin-dependent protein kinase activity; F: ATP binding; P: regulation of DNA-templated transcription; P: blue light signaling pathway; F: blue light photoreceptor activity; P: phosphorylation; F: protein serine kinase activity
R. tropici CIAT 899 shared proteins detected in EVs isolated from bean and L. burttii
AGB72165.1 cell cycle two-component system response regulator CtrA P: phosphorelay signal transduction system; F: DNA binding; P: regulation of DNA-templated transcription
AGB72332.1 transketolase F: transketolase activity; F: metal ion binding
AGB72959.1 helicase-related protein F: RNA helicase activity; F: hydrolase activity
AGB73355.1 ABC transporter ATP-binding protein F: ATP binding; F: ATP hydrolysis activity
AGB71388.1 ABC-type transporter Mla subunit MlaD C: extracellular region; P: lipid transport; F: lipid binding; C: membrane; P: lipoprotein metabolic process
AGB75654.1 sarcosine oxidase subunit α family protein F: sarcosine oxidase activity; P: tetrahydrofolate metabolic process
AGB72925.1/AGB70113.1 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC F: ATP binding; P: carbohydrate transport; F: ATP hydrolysis activity; C: ATP-binding cassette (ABC) transporter complex; P: transmembrane transport; F: ABC-type transporter activity
AGB71395.1/AGB71699.1/AGB74627.1 ABC transporter substrate-binding protein C: outer membrane-bounded periplasmic space; C: ATP-binding cassette (ABC) transporter complex; P: transmembrane transport
AGB69911.1/AGB74672.1 methyl-accepting chemotaxis protein F: transmembrane signaling receptor activity; P: chemotaxis; P: signal transduction; C: membrane; F: oxygen binding; F: heme binding
S. fredii HH103 and R. tropici CIAT 899 shared proteins detected in EVs isolated from soybean, bean and L. burttii
CCE95810.1 ABC transporter ATP-binding protein F: ATP binding; C: membrane; F: ATP hydrolysis activity; P: transmembrane transport; F: ABC-type transporter activity
CCE97944.1 ABC transporter substrate-binding protein P: carbohydrate transport; C: periplasmic space
a

C: cellular component; P: biological process; F: molecular function.