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. 2024 Dec 31;2024:gigabyte144. doi: 10.46471/gigabyte.144

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© The Author(s) 2024.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — (A) Raw coverage plot of the frequency at which k-mers are covered within the raw reads, following k-mer assessment by Jellyfish (k-mer size = 21 bases). Figure generated by GenomeScope. (B) Log-transformed coverage plot of the frequency at which k-mers are covered within the raw reads, following k-mer assessment by Jellyfish (k-mer size = 21 bases). Figure generated by GenomeScope. (C) Key statistics about the ﬁnal assembly (IPA no phase, purged) from Mercury. (D) Boxplot of the quality value of the contigs based on their size. The boxplot displays the median, 25th and 75th percentiles, with whiskers extending to the maximum and minimum values, within a distance from the box up to 1.5 times the interquartile range from Mercury. (E) Distribution of the contigs in the assembly based on their size.