Table 1.
Polymorphism detection in the course of positional cloning the QTL on BTA6
|
Number of exons
|
Sequencing size (bp)
|
Polymorphism
|
|||||
|---|---|---|---|---|---|---|---|
| Gene | Total | Sequenced | Exons | Introns | Promoter | Typea | Location |
| MLR1 | 7 | 2 | 482 | 228 | Insertion TGAT | Exon 7 (AJ871966) | |
| MED28 | 5 | 2 | 133 | 1268 | C to T | Exon 4 (AJ871964) | |
| LAP3 | 13 | 2 | 147 | 450 | C to T | Exon 12 (AJ871963) | |
| IBSP | 7 | 1 | 560 | A to G | Exon 7 (NM_174084b) | ||
| SPP1(1) | 7 | 7 | 1362 | 5633 | 1205 | A to G | Intron 5 (AJ871176) |
| SPP1(2) | T to G | Exon 7 (AJ871176) | |||||
| PKD2 | 15 | 15 | 3023 | 2485 | 2931 | Insertion A | Promoter (AJ871176) |
| ABCG2(1) | 16 | 15c | 2029 | 3416 | A to T | Intron 3 (AJ871176) | |
| ABCG2(2) | A to Cd | Exon 14 (AJ871176) | |||||
| PPMIK | 7 | 1 | 490 | GC to AT | Exon 2 (AJ871967, AJ871968) | ||
| HERC6 | 23 | 330 | Insertion C | Intron 5 (AJ877268) | |||
| FAM1 3A1(1) | 18 | 18 | 2580 | 2190 | A to G | Intron 9 (Cohen et al. 2004a) | |
| FAM1 3A1(2) | C to A | Exon 12 (Cohen et al. 2004a) | |||||
| Total | 10,806 | 16,713 | 4136 | ||||
a
The more frequent allele is listed first
b
At position 802
c
Coding region of this gene starts in exon 2
d
Y581S