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. 2005 May 29;6:129. doi: 10.1186/1471-2105-6-129

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Copyright © 2005 Larsson et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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FC effects on the endurance training data set: SAM analysis was used at various fold changes studying the exercise data set while scoring genes with a q-value of <0.05 and FC>1.5. This was done to asses the effect of the fold change option in the SAM Excel addin on genes reported as significant at a higher fold change. The figure shows the number of scored genes using 4 different chip and sample combinations: (A) All eight subjects before and after training (totally 16 arrays) were compared in a paired analysis using the U95A chips. (B) All eight subjects before and after training (totally 16 arrays) were compared in a paired analysis using the U95B chips. (C) The reduced group consisting of low four low responders (totally 8 arrays) were compared in a paired analysis using the U95B chips. (D) The reduced group consisting of low four low responders (totally 8 arrays) were compared in a paired analysis using the U95D chips.