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. 2025 Jan 16;16:710. doi: 10.1038/s41467-025-55928-5

Table 4.

GEO accession numbers of sequencing data

Datasets (Generated in this study) GEO accession number
RNA-seq. of Pox virus infection GSE234489
CUT&RUN of HSV-1 infection GSE272015
RNA-seq. of DUX4-KO, CUT&Tag of HSV-1 infection GSE234489
CHIP-seq of DUX4 and RNAseq upon HSV-1 infection GSE174759
Datasets (Used for reanalysis) Accession number
ATAC-seq upon HSV-1 infection GSE100611
CHIP-seq of histone marker upon HSV-1 infection GSE124803
Pro-seq of HSV-1 infection GSE106126
RNA-seq. of HSV1 infection GSE59717
GSE129715
GSE97009
GSE101435
RNA-seq. of FSHD GSE153301
RNA-seq. of 8 cell stage GSE36552
RNA-seq. of PAA treatment upon HSV-1 infection GSM5608614
RNA-seq. of EBV infection GSE155345
RNA-seq. of KSHV infection GSE123898
GSE179742
CHIP-seq of DUX4 (DUX4 induction) GSM837613
ICP4 ChIP-seq SRP131749
single-cell RNA-seq. of nasopharyngeal carcinoma GSE162025
single-cell RNA-seq. of Head and neck squamous cell carcinoma GSE164690
single-cell RNA-seq. of Merkel cell carcinoma tumor GSE226438
RNA-seq. of Ad5 infection PRJEB57806