Table 4.

FBAT-e analyses using setafftrait 0 -1 0, testing specifically for affected women

Marker	Allele	Allele frequency	Number of informative families	Z score	P
Additive model: biallelic test
D5S1953	1	0.56	47	0.47	0.635
rs26307	T	0.19	22	0.32	0.751
rs27356	T	0.20	24	1.03	0.302
3088132	C	0.21	20	0.37	0.712
rs153929	G	0.24	46	1.31	0.191
rs258215	T	0.41	30	1.54	0.123
rs28006	T	0.26	31	2.82	0.004*
rs25957	G	0.23	23	2.82	0.004*
ANKH-OR	2	0.52	59	0.94	0.347
D5S1991	1	0.52	53	1.10	0.270
D5S1954	2	0.36	45	1.38	0.168
Recessive model: biallelic test
D5S1953	2	0.44	39	-1.21	0.227
rs26307	C	0.81	26	0.52	0.606
rs27356	T	0.20	10	1.81	0.069
3088132	G	0.79	22	0.08	0.930
rs153929	A	0.76	44	-1.39	0.162
rs258215	A	0.58	21	-1.76	0.077
rs28006	C	0.74	28	-2.49	0.012*
rs25957	C	0.76	23	-2.25	0.024*
ANKH-OR	2	0.52	34	1.14	0.254
D5S1991	1	0.51	33	1.52	0.127
D5S1954	1	0.64	45	-1.54	0.122

*Statistically significant findings. FBAT, family-based association testing.