Table 5.

FBAT-e analyses using setafftrait 1 0 0, testing specifically for affected men

Marker	Allele	Allele frequency	Number of informative families	Z score	P
Additive model: biallelic test
D5S1953	2	0.44	47	0.25	0.805
rs26307	C	0.80	22	2.06	0.039*
rs27356	C	0.79	25	2.63	0.008*
3088132	G	0.79	18	1.23	0.216
rs153929	A	0.76	36	0.49	0.619
rs258215	A	0.58	32	0.81	0.419
rs28006	T	0.26	37	0.15	0.877
rs25957	C	0.77	33	0.76	0.446
ANKH-OR	1	0.48	64	1.04	0.297
D5S1991	2	0.49	64	0.39	0.696
D5S1954	2	0.36	49	0.33	0.736
Recessive model: biallelic test
D5S1953	1	0.56	40	-0.83	0.406
rs26307	C	0.81	25	2.51	0.012*
rs27356	C	0.80	28	2.99	0.002*
3088132	G	0.79	22	1.44	0.149
rs153929	A	0.76	39	0.71	0.477
rs258215	A	0.59	23	0.60	0.543
rs28006	T	0.26	16	0.33	0.739
rs25957	C	0.76	29	0.64	0.518
ANKH-OR	2	0.52	44	-1.26	0.205
D5S1991	1	0.51	46	-0.71	0.472
D5S1954	1	0.64	43	-0.65	0.510

*Statistically significant findings. FBAT, family-based association testing.