Table 4.
COG annotation classification.
| COG type | COG type description | Total genes | Up DEGs | Down DEGs |
|---|---|---|---|---|
| D | Cell cycle control, cell division, chromosome partitioning | 1 | 0 | 1 |
| M | Cell wall/membrane/envelope biogenesis | 14 | 7 | 7 |
| O | Posttranslational modification, protein turnover, chaperones | 5 | 2 | 3 |
| T | Signal transduction mechanisms | 3 | 2 | 1 |
| U | Intracellular trafficking, secretion, and vesicular transport | 1 | 0 | 1 |
| V | Defense mechanisms | 7 | 0 | 7 |
| J | Translation, ribosomal structure and biogenesis | 17 | 6 | 11 |
| K | Transcription | 8 | 2 | 6 |
| L | Replication, recombination and repair | 21 | 3 | 18 |
| E | Amino acid transport and metabolism | 36 | 27 | 9 |
| F | Nucleotide transport and metabolism | 9 | 7 | 2 |
| G | Carbohydrate transport and metabolism | 9 | 8 | 1 |
| H | Coenzyme transport and metabolism | 5 | 2 | 3 |
| I | Lipid transport and metabolism | 4 | 1 | 3 |
| P | Inorganic ion transport and metabolism | 6 | 0 | 6 |
| Q | Secondary metabolites biosynthesis, transport and catabolism | 1 | 1 | 0 |
| S | Function unknown | 66 | 31 | 35 |