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. 2001 Dec 18;99(1):268–273. doi: 10.1073/pnas.012422299

Table 1.

Copia-RT sequences sampled and Jukes–Cantor corrected estimates of nucleotide diversity (πJC)

Host genome N* GenBank accession number πJC Reference
A. thaliana 43 TE Database 0.76 TE Database
H. vulgare 22 AJ241322–343 0.68 18
L. esculentum 25 AJ228804–805, D12844–845, AF072637–656 0.56 19
O. sativa 51 Z75496–518, AB017978–18000, M94492 0.54 20
P. abies 51 AJ288018–053, AJ288171–181, AJ290660–676,  AJ224363–368 0.53 N. Friesen, personal communication, 8
P. sativum 31 AJ405217–247 0.80 21
V. faba 27 AJ239201–207, AJ239227 0.68 6
V. melanops 25 AJ239468–494 0.68 6
V. sativa 27 AJ239495–521 0.74 6
T. aestivum 74 AJ241094–115, D90618–671 0.49 22
Z. mays 28 D12830, AF398186–213 0.55 37, this study
*

Number of sequences analyzed.