Table 1.
Allele | F | N | Haplotype | Allele | F | N | Haplotype |
2R | 0.088 | 55 | 6R | 0.022 | 24 | ||
43 | 1-4 | 16 | 1-2-3-2-3-4 | ||||
12 | 30-4* | 2 | 1-2-6-5-2-20 | ||||
3R | 0.024 | 36 | 2 | 1-2-6-5-2-4 | |||
16 | 1-7-4 | 1 | 1-2-14-17-2-4 | ||||
9 | 1-2-4 | 1 | 1-6-5-2-5-4 | ||||
4 | 1-11-33* | 1 | 1-2-13-2-5-19 | ||||
3 | 1-9-4 | 1 | 24-6-5-2-5-4 | ||||
1 | 1-2-22 | 7R | 0.192 | 199 | |||
1 | 1-2-21 | 177 | 1-2-6-5-2-5-4 | ||||
1 | 1-2-31 | 5 | 1-2-6-5-2-5-19* | ||||
1 | 1-2-32 | 3 | 1-2-6-5-2-3-4 | ||||
4R | 0.651 | 250 | 3 | 1-2-6-5-13-5-4* | |||
238 | 1-2-3-4 | 2 | 1-8-25-5-2-5-4 | ||||
3 | 1-2-14-4 | 2 | 1-2-3-5-2-5-4 | ||||
2 | 1-2-13-4 | 1 | 1-2-6-5-2-13-4 | ||||
2 | 1-2-12-4 | 1 | 1-2-29-17-2-5-4 | ||||
1 | 1-17-3-4 | 1 | 1-2-6-2-2-5-4 | ||||
1 | 1-9-12-4 | 1 | 1-8-25-5-2-3-4 | ||||
1 | 1-8-3-4 | 1 | 1-2-6-16-2-3-4 | ||||
1 | 1-10-3-4 | 1 | 1-2-6-5-2-14-4 | ||||
1 | 1-9-3-4 | 1 | 1-2-3-17-2-5-4 | ||||
5R | 0.016 | 27 | 8R | 0.006 | 6 | ||
12 | 1-3-2-3-4* | 2 | 1-2-6-5-17-2-13-35* | ||||
4 | 1-2-13-34-4* | 1 | 1-2-6-5-2-2-5-4 | ||||
3 | 1-2-2-3-4 | 1 | 1-2-6-26-5-26-3-35 | ||||
2 | 1-2-6-5-4 | 1 | 1-2-6-26-5-26-3-4 | ||||
2 | 1-11-2-3-4 | 1 | 1-2-6-18-5-18-3-4 | ||||
1 | 1-3-2-14-4 | ||||||
1 | 1-2-6-23-4 | 9R | <0.001 | 1 | 1-8-25-5-2-5-2-23-4 | ||
1 | 1-2-3-9-4 | 10R | <0.001 | 1 | 1-2-15-6-2-6-5-2-5-4 | ||
1 | 1-2-3-27-4 | 11R | <0.001 | 1 | 1-2-3-27-5-23-25-5-2-5-28 |
F, observed allele frequency in 2,836 chromosomes from 37 worldwide human populations (3,17); N, allele number identified by sequence analysis in this study (non-4R alleles were oversampled by 2–3-fold); haplotype, haplotypes are indicated using the repeat motif nomenclature proposed (Fig. 2). Alleles with adjacent asterisks indicate common variants found only in a single population sample (2R 30-4, Surui; 3R 1-11-33, Nasioi; 5R 1-3-2-3-4, Chinese; 5R 1-2-13-34-4, Biaka; 7R 1-2-6-5-2-5-19, Surui; 7R 1-2-6-5-13-5-4, Nasioi; 8R 1-2-6-5-17-2-13-35, Biaka). Alleles with a single representation by definition were found in only one population.