Table 5.
Interspecies substitution rates
| Gene | Alignment length | Number of reads | Frequency per kilobase | ||||
| M f. | M.m. | M.n. | m vs n* | m vs f* | n vs f* | ||
| ADH1B | 819 | 8 | 5 | 14 | 0.00 | 0.00 | 2.44 |
| AFP | 537 | 1 | 3 | 1 | 11.17 | 7.45 | 3.72 |
| ALB | 2047 | > 20 | > 20 | > 20 | 0.00 | 0.49 | 0.49 |
| AMBP | 731 | 1 | 5 | 4 | 4.10 | 1.37 | 5.47 |
| ANGPTL3 | 371 | 1 | 1 | 2 | 2.70 | 0.00 | 2.70 |
| APOA1 | 746 | 10 | 76 | 2 | 10.72 | 4.02 | 5.36 |
| APOA2 | 431 | 3 | 4 | 5 | 6.96 | 4.64 | 2.32 |
| APOC4 | 312 | 3 | 1 | 1 | 16.03 | 12.82 | 16.03 |
| APOE | 217 | 2 | 2 | 2 | 4.61 | 4.61 | 0.00 |
| APOH | 1007 | 4 | 14 | 14 | 2.98 | 0.00 | 2.98 |
| B2M | 587 | 1 | 90 | 1 | 0.00 | 11.93 | 11.93 |
| EEF1A1 | 920 | 7 | >20 | 7 | 0.00 | 0.00 | 0.00 |
| FGA | 379 | 3 | 6 | 1 | 7.92 | 0.00 | 7.92 |
| FGB | 407 | 3 | 43 | 11 | 2.46 | 0.00 | 2.46 |
| FGG | 694 | 3 | 24 | 9 | 1.44 | 1.44 | 2.88 |
| HPR | 567 | 2 | 20 | 12 | 3.53 | 1.76 | 1.76 |
| RPL9 | 680 | 1 | 35 | 1 | 4.41 | 4.41 | 0.00 |
| SERPINC1 | 787 | 1 | 3 | 1 | 1.27 | 2.54 | 1.27 |
| TTR | 599 | 5 | 2 | 6 | 5.01 | 3.34 | 5.01 |
| UBC | 460 | 1 | 40 | 1 | 0.00 | 0.00 | 0.00 |
| UGT2B7 | 228 | 1 | 13 | 1 | 8.77 | 0.00 | 8.77 |
| Mean | 5.88 | 3.80 | 5.22 | ||||
| Median | 3.53 | 1.44 | 2.70 | ||||
| SD | 4.38 | 3.80 | 4.19 | ||||
*Pair wise interspecies substitution frequencies computed on a gene-by-gene basis M.f., Macaca fascicularis; M.m., M. mulatta; M.n., M. nemestrina.