Table IV.
Gene
|
Tag
|
UniGene Cluster
|
EST Counta
|
SAGEb
|
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P1 | P2 | P3 | N1 | N2 | N3 | L1 | L2 | L3 | Total | ||||
AK070187 | AAGCTGTCGT | Os.12697 | 64 | 0 | 0 | 0 | 43 | 2 | 0 | 47 | 0 | 0 | 92 |
AK071196 | AATAAAGTAG | Os.4976 | 27 | 11 | 0 | 0 | 494 | 238 | 0 | 835 | 0 | 6 | 1,584 |
AK071325 | CAGGCTTTTT | Os.37927 | 21 | 0 | 0 | 0 | 71 | 7 | 0 | 43 | 0 | 0 | 121 |
AK101023 | TTCTGCGGTG | Os.49687 | 19 | 0 | 0 | 0 | 38 | 0 | 0 | 29 | 0 | 0 | 67 |
AK100805 | GGCAATGCAC | Os.4041 | 19 | 0 | 0 | 0 | 20 | 0 | 0 | 23 | 0 | 0 | 43 |
AK072792 | CACATATATA | Os.2402 | 15 | 1 | 0 | 1 | 10 | 0 | 0 | 14 | 0 | 0 | 26 |
AK109576 | TGTGAGATCG | Os.11067 | 12 | 4 | 0 | 0 | 142 | 10 | 0 | 157 | 0 | 0 | 313 |
AK107558 | CAATATGATGc | Os.12275 | 12 | 0 | 1 | 0 | 73 | 7 | 0 | 102 | 0 | 3 | 186 |
AK071282 | ATTAACACGA | Os.12275 | 12 | 0 | 0 | 0 | 6 | 0 | 0 | 13 | 0 | 0 | 19 |
AK070631 | ACGGTGGACG | Os.8140 | 6 | 0 | 0 | 0 | 12 | 3 | 0 | 13 | 0 | 0 | 28 |
AK072672 | ACCGGTGATA | Os.5819 | 6 | 0 | 0 | 0 | 18 | 0 | 0 | 17 | 0 | 0 | 35 |
AK106951 | GCATCGCCTT | Os.10688 | 5 | 0 | 0 | 0 | 74 | 4 | 0 | 51 | 0 | 0 | 129 |
AK072232 | TGGCCCCAAA | Os.4957 | 5 | 0 | 0 | 0 | 12 | 0 | 0 | 22 | 0 | 0 | 34 |
AK070646 | TTTTTTTCCG | Os.9384 | 5 | 0 | 0 | 0 | 33 | 0 | 0 | 32 | 0 | 0 | 65 |
AK069853 | ATCGAGTCTT | Os.2405 | 4 | 0 | 0 | 0 | 23 | 0 | 0 | 18 | 0 | 0 | 41 |
AK070815 | CTGCATTTGT | Os.8166 | 4 | 1 | 1 | 0 | 16 | 0 | 0 | 26 | 0 | 0 | 44 |
AK069283 | TTCAACTCGC | Os.7026 | 3 | 0 | 0 | 0 | 7 | 0 | 0 | 9 | 0 | 1 | 17 |
AK107837 | AATAACTCTC | Os.10395 | 2 | 0 | 0 | 0 | 28 | 2 | 0 | 46 | 0 | 6 | 82 |
AK109762 | CGTGTTCGGT | Os.20322 | 2 | 0 | 0 | 0 | 7 | 0 | 0 | 17 | 0 | 0 | 24 |
AK111098 | TGTCCTTCCA | Os.9665 | 2 | 0 | 0 | 0 | 163 | 19 | 0 | 176 | 0 | 1 | 359 |
AK071058 | AGCTTAAGAG | Os.4956 | 2 | 0 | 0 | 0 | 7 | 3 | 0 | 14 | 0 | 0 | 24 |
AK060272 | GTTATAGTCC | Os.12736 | 2 | 0 | 1 | 0 | 5 | 2 | 3 | 13 | 0 | 3 | 27 |
AK070171 | GTTGAGGAGG | Os.52968 | 1 | 0 | 0 | 0 | 6 | 0 | 0 | 9 | 0 | 0 | 15 |
AK107744 | CTGCTGATGA | Os.55257 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 9 | 0 | 0 | 10 |
AK070921 | CCTACTCCTA | Os.25495 | 1 | 2 | 0 | 0 | 133 | 58 | 0 | 110 | 0 | 3 | 306 |
AK071236 | CCCGATCGAA | Os.5821 | 1 | 0 | 0 | 0 | 14 | 5 | 0 | 21 | 0 | 0 | 40 |
EST data are from public data that were acquired from a cDNA library made from panicle material of Nipponbare at flowering stage (http://www.ncbi.nlm.nih.gov/UniGene/library.cgi?ORG=Os&LID=499).
The tag numbers are listed as individual SAGE libraries.
Tag matches more than one gene.