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. 2025 Jan 17;12:1421534. doi: 10.3389/fchem.2024.1421534

TABLE 3.

Molecular dynamics simulation properties of native proteins and molecules of interest.

Receptor Name RSMF RSM D rGyr SASA MolSA PSA
8FZM Catechin glucoside 1.496±0.67 2.013±0.25 4.884±0.14 276.40±39.10 377.11±2.92 363.75±711
Drevogenin D 1.397±0.51 0.761±0.18 3.805±0.02 283.57±1.92 315.57±1.92 171.18±6.64
8FZM-alone 1.441±0.51 2.861±0.47
7K7U Catechin glucoside 2.336±0.81 1.330±0.24 5.141±0.07 257.82±38.06 381.25±2.15 371.54±6.07
Drevogenin D 4.868±1.41 0.635±0.12 3.769±0.02 438.25±117.3 314.38±1.80 161.52±3.71
7K7U-alone 3.215±1.39 10.14±1.60

Note: the Angstrom unit (Å) was used to measure the mean ± SEM of the values. rGyr, radius of gyration; RMSD, root mean square deviation; RMSF, root mean square fluctuation; PSA, pressure swing adsorption; SASA, solvent-accessibility surface area; MolSA, molecular surface area.