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. 2025 Feb 3;26(1):bbaf031. doi: 10.1093/bib/bbaf031

Table 2.

Five single-cell RNA-seq datasets for constructing simulated bulk RNA-seq data.

  Accession ID Abbreviation Tissue/Organ Platform Samples Cell types Cells Genes Median counts/Cell
1 E-MTAB-8142 SKIN Healthy skin 10× Chromium 3 22 79,583 12 704 6527
2 GSE146771 CRC Colon cancer Smart-seq2 10 8(24) 10,456 15 160 19 952
3 GSE111672 PDAC Pancreas inDrop 2 15(18) 3659 19 736 2541
4 aldinger20 CERE Cerebellum SPLiT-seq 5 21 4462 29 523 747.5
5 GSE158291 PTC Thyroid carcinoma BD Rhapsody 4 7 3552 14 305 2091

Numbers in parentheses indicate the number of cell types after cell population subdivision.