Table A.
Conditions Used for PCR
Primer |
||||
Transcript | Forward | Reverse | PCR Conditions | Product size(bp) |
NESP55 | 5′-GTCACTAATGGAGGACGCCGT-3′ | 5′-TTCGTAGCAGGCACGCACTCCTTCAACCTC-3 | 94°C × 3 min; 39 cycles of 94°C × 40 s, 62°C × 35 s, 72°C × 1 min; then 72°C × 5 min | 400 |
XLαs | 5′-GGATGCCTCCGCTGGTTTGAGCATCGGG-3′ | 5′-TTCGTAGCAGGCACGCACTCCTTCAACCTC-3′ | 94°C × 4 min; 39 cycles of 94°C × 40 s, 64°C × 30 s, 72°C × 1 min; then 72°C × 5 min | 818 |
Exon 1A | 5′-GGACACTCAGTCGCGTCGGCAC-3′ | 5′-TTCGTAGCAGGCACGCACTCCTTCAACCTC-3′ | 94°C × 3 min; 30 cycles of 94°C × 30 s, 72°C × 3 min; then 72°C × 5 min | 510 |
Gsα | 5′-ATGGGCTGCCTCGGGAACAGT-3′ | 5′-TTCGTAGCAGGCACGCACTCCTTCAACCTC-3′ | 94°C × 3 min; 35 cycles of 94°C × 1 min, 67°C × 35 s, 72°C × 40 sec; then 72°C × 5 min | 482 |
Exon 1Abisulfite sequencing: | ||||
1st round | 5′-TAGGGGTYGTTGTTATGGGT-3′ | 5′-AATAACAAAAATCTATTTACCCTCAAAC-3′ | 94°C × 4 min; 39 cycles of 94°C × 45 s, 62°C × 45 s; then 72°C × 6 min | …a |
2nd round | 5′-GGTTGYGTTAGGTGGTTGG-3′ | 5′-CTCCTTAATTTAACTCTTAAACAC-3′ | 94°C× 4 min; 39 cycles of 94°C × 45 s, 62°C × 45 s; then 72°C × 6 min | 340 |
Use PCR product as template in second round.