Table 2.
The cell type, abbreviation, and marker gene of blood samples
| Abbreviation | Cell type | Markers |
|---|---|---|
| TCells | T cells | CD2, CD3D, TRAC, TRBC2 |
| BCells | B cells | CD79A, CD79B, MS4A1 |
| PlasmaCells | Plasma cells | JCHAIN, MZB1, CD79A, IGHG1 |
| MPs | Mononuclear phagocytes | LYZ, CD14, VCAN, CD1C, FCER1A |
| Erythrocytes | Erythrocytes | HBB, HBA1, ALAS2, SNCA, CA1 |
| Neutrophils | Neutrophils | CSF3R, CXCR2, FCGR3B, LCN2, CAMP |
| Platelets | Platelets | PPBP, TUBB1, PF4, GP9 |
| Basophils | Basophils | CLC, GATA2, CPA3 |
| pDCs | Plasmacytoid dendritic cells | IL3RA, CLEC4C, LILRB4, TCF4, TCL1A |
| NaiveT | Naive T cells | CCR7, SELL, LEF1, TCF7, CD4, CD8A |
| CD8Teff | CD8+ effector T cells | CD8A, NKG7, GZMB, GNLY |
| Treg | Regulatory T cells | FOXP3, IL2RA, CTLA4, IKZF2 |
| HelperT | T helper cells | CD40LG, ICOS, GATA3, IL7R |
| NK | Natural killer cells | NKG7, KLRF1, NCR3, CD3D |
| Monocytes | Monocytes | CD14, VCAN, FCN1 |
| cDC2 | Conventional type 2 dendritic cells | CD1C, CD1E, FCER1A, CLEC10A |
| HSCs | Hematopoietic stem cells | CD34, SPINK2, HOPX |