Table C.

Alu and Satellite Junction Enrichment by Chromosomal Location^[Note]

	Interchromosomal				Intrachromosomal
	Junction				Junction
Repeat Type	Fraction(%)	No.	Control Fraction(%)	Enrichment	Fraction(%)	No.	Control Fraction(%)	Enrichment
Alu	20.9	579	11.5	1.8-fold	27.5	653	17.0	1.6-fold
Satellite	10.7	278	4.9	2.2-fold	1.5	44	1.0	1.5-fold

Note.— Alignments were divided into those duplicated between chromosomes (interchromosomal) and those duplicated within a chromosome (intrachromosomal). The junction and control fraction were calculated separately for each type of duplication. The enrichment compares the relative repeat content of the junction with those of the control regions.