Table 4.
Summary of SNP Markers
| Marker and Primer Sequence (5′→3′)a | Enzyme | NTb | Cut | Product(bp) |
| SNP2 (rs762570): | ||||
| F: GCC TTC TGA CCT CTC TGG AA | Bsu36I | C | Yes | 291, 206 |
| R: AAC ATC TGC ACC TCC AAA CC | T | No | 497 | |
| SNP4 (rs970572): | ||||
| F: CCA AAG TAG CAG GGA ACT GG | BstUI | A | No | 495 |
| R: AAA GGT GCA CTG TGG GAA AC | G | Yes | 272, 223 | |
| BssSI | A | Yes | 276, 219 | |
| G | No | 495 | ||
| SNP13(rs2128342): | ||||
| F: TCA TGA GAA AAG CGA TGG AA | RsaI | A | Yes | 285, 118, 59 |
| R: TTG GTT TCT CAG CCT AGT TGC | G | No | 344, 118 | |
| SNP3 (rs1021123): | ||||
| F: ACG GGA AGA GAT GCA AAG GT | MaeIII | C | Yes | 314, 173 |
| R: GCT TTC CCT GTG ATT CTT TAC AA | T | No | 487 | |
| SNP9 (rs2062125): | ||||
| F: CAG AGT CTC GCT TCA TCA CC | HinP1I | C | Yes | 329, 126 |
| R: TCC GTC GCA AAA ACA AAA AT | T | No | 455 | |
| SNP8 (rs1482409): | ||||
| F: ACC TCA GCC TCC CCA AGT AT | SspI | C | No | 502 |
| R: CAG GGG TTG TGA GAG TGA CA | T | Yes | 277, 225 | |
| SNP7 (rs1351596): | ||||
| F: GGA ATG ACC CTG CTT GTT TC | Tsp45I | C | Yes | 267, 133, 104 |
| R: CTA GTG ATG GGC ACC CTA GC | MaeIII | T | No | 371, 133 |
F = forward primer; R = reverse primer.
NT = nucleotide.