Table 4.
Haplotype Structure in Subset of SNPs in Singapore Chinese, Singapore Malays, and Europeans
|
EM Frequency(%) |
||||
| IDa | Haplotypeb | SingaporeChinese | SingaporeMalays | Europeans |
| 1 | 111111111111111 | 27.1 | 40.5 | 18.7 |
| 2 | 001101011110111 | 25.0 | 12.5 | 8.8 |
| 3 | 110111111111111 | 13.5 | 9.9 | … |
| 4 | 111011111111100 | 11.7 | 1.9 | … |
| 5 | 111110000001011 | 5.8 | 5.6 | 5.6 |
| 6 | 011110000001011 | 3.1 | … | .5 |
| 7 | 001111111111111 | 2.3 | 1.9 | 5.8 |
| 8 | 111110010001011 | 1.7 | 2.8 | 2.0 |
| 9 | 101101011110111 | 1.6 | 2.0 | … |
| 10 | 000101011110111 | .8 | … | … |
| 11 | 010111111111111 | .8 | 6.6 | … |
| 12 | 111011111111111 | .4 | 2.8 | … |
| 13 | 111001011110111 | … | 1.9 | … |
| 14 | 111111111111101 | … | 1.9 | … |
| 15 | 110111111101111 | … | 1.1 | … |
| 16 | 111111111110111 | … | 1.1 | … |
| 17 | 111101011110111 | … | 1.0 | … |
| 18 | 111111100111111 | … | … | 15.0 |
| 19 | 111110011001011 | … | … | 11.6 |
| 20 | 001110011001011 | … | … | 4.4 |
| 21 | 101110011001011 | … | … | 3.3 |
| 22 | 101110000001011 | .9 | … | 2.3 |
| 23 | 001101000110111 | … | … | 1.7 |
| 24 | 011011111111100 | … | … | 1.6 |
| 25 | 011111111111111 | … | 1.0 | 1.4 |
| 26 | 001101010110111 | … | … | 1.2 |
| 27 | 001110000001011 | … | … | 1.1 |
| 28 | 111111110111111 | … | … | .9 |
| 29 | 111111101111111 | .8 | … | .9 |
| 30 | 001100011010111 | … | … | .8 |
a
Haplotype designation.
b
Loci are arranged in the order snp1–snp15 (as in table 2), excluding snp4a–snp4f and snp9a–snp9d. Haplotypes are reported if observed in resolved chromosomes or if EM frequency is >1% in at least one population. 1 = major allele; 0 = minor allele.